PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV94822.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 500aa MW: 54227.4 Da PI: 8.8335

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV94822.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.4	2.5e-05	19	41	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H RWV94822.1 19 FICEVCNKGFQREQNLQLHRRGH 41 89*******************88 PP
2	zf-C2H2	12.8	0.00037	95	117	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ RWV94822.1 95 WKCDKCSKRYAVQSDWKAHSKTC 117 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
PDAEVVALSP KTLLATNRFI CEVCNKGFQR EQNLQLHRRG HNLPWKLKQK NPKEVRRRVY 60 ICPEPTCVHH EPSRALGDLT GIKKHYCRKH GEKKWKCDKC SKRYAVQSDW KAHSKTCGTR 120 EYRCDCGTLF SRRDSFITHR AFCDALAQES ARIPAGMNAI GGSHFYGNTG IHLGLPQLSS 180 QLSSLQEQTH CANDGAAPFN HVTLPSFRPP QSATPFYLGG GSSQDIHEDT QLLQSKPFHG 240 LMQLQDHLQH NTNASSSSSA AAATDLFNLS IFSNGNNRST ITNSSNSGIN QNAHLLISDH 300 FNNASGSNEP HTLFAGNPLI GNHMDANMFD QSVNTESVPP HMSATALLQK AAQMGATSSC 360 SSASSLLRGI GSLYSSNSKN AGFQASATQV ETESHFQDLM NSLTNGNTGR FNGGNHQKTG 420 FSGFIPGIGN MNESKLQRNL SAGGLGTSDS LTRDFLGVGS MMRRGGITPR EQHLGINISS 480 LDPELKSGSS TRSFDGGSLL

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

PDAEVVALSP KTLLATNRFI CEVCNKGFQR EQNLQLHRRG HNLPWKLKQK NPKEVRRRVY  60
ICPEPTCVHH EPSRALGDLT GIKKHYCRKH GEKKWKCDKC SKRYAVQSDW KAHSKTCGTR  120
EYRCDCGTLF SRRDSFITHR AFCDALAQES ARIPAGMNAI GGSHFYGNTG IHLGLPQLSS  180
QLSSLQEQTH CANDGAAPFN HVTLPSFRPP QSATPFYLGG GSSQDIHEDT QLLQSKPFHG  240
LMQLQDHLQH NTNASSSSSA AAATDLFNLS IFSNGNNRST ITNSSNSGIN QNAHLLISDH  300
FNNASGSNEP HTLFAGNPLI GNHMDANMFD QSVNTESVPP HMSATALLQK AAQMGATSSC  360
SSASSLLRGI GSLYSSNSKN AGFQASATQV ETESHFQDLM NSLTNGNTGR FNGGNHQKTG  420
FSGFIPGIGN MNESKLQRNL SAGGLGTSDS LTRDFLGVGS MMRRGGITPR EQHLGINISS  480
LDPELKSGSS TRSFDGGSLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-107	C2H2 family protein