PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV94968.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 250aa    MW: 27423.6 Da    PI: 4.9812
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV94968.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH36.86.4e-12138160527
                 --SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHgp 27 
                  C +++r+G+C+yG++CkF+H+p
  RWV94968.1 138 DCAYYLRSGICRYGANCKFNHPP 160
                 7********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MEVGLPNADE DDGEELVFGL GFRTRPLPPP PSSHDTDTID GDLEKLGLDE KIADKLQFCP  60
VEEKKCTGGV GAFETEESRG EKSEEEGGAD GEKEGLAGKA DVEKVSETSK KADAASKDDE  120
GENMIMGIYY PQRPGQLDCA YYLRSGICRY GANCKFNHPP RRRLTQVCNT GRLCSYRYIP  180
VRQLIGTWTS CYRMVHTGPP ADRYMNRLLS DGTVDQQLQK ALGRSPKRSS EASPERLVQS  240
PGGALQRGAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63260.22e-12C3H family protein