PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV95239.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SBP

Protein Properties

Length: 392aa MW: 41800.7 Da PI: 8.7547

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV95239.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	118.9	2.6e-37	71	143	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC++dl+ +k y+ rhkvC +hskap+v+v+gleqrfCqq fh+l efD++krsCrrrLa+hnerrrk+ RWV95239.1 71 RCQVEGCNVDLTGVKAYYCRHKVCGMHSKAPKVVVAGLEQRFCQQ---FHQLPEFDQGKRSCRRRLAGHNERRRKP 143 6*****************************************9...************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MDSSSLKASG ALSSASDALH GLKFGQKIYF DDGGGGSGSS SKAPTAPAQE AAPPTKKGKG 60 VAQAGQQQPP RCQVEGCNVD LTGVKAYYCR HKVCGMHSKA PKVVVAGLEQ RFCQQFHQLP 120 EFDQGKRSCR RRLAGHNERR RKPPPGPFAS RYGRLASSVH GQKHLDTAAS TLSCRYPFKH 180 AAFGCHANMV CFTEDPSRFR SFLMDFTYPY LSSTARNLWP TARAGDRVAS NEWHVAFDTP 240 PGAAAMHGTH ACFQGPPAAT FCSPMEFPPG ECLGGVSDSS CALSLLSTHP WSSNSARNRA 300 PVIAPSSSTF DGPPMAQSAI PGNYGTSSWG LRGHGIRTNS SHEIQHATGA TEASDAHFLG 360 QVELALQENG QCLDHGSARA YAHSSLGMHW SL

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MDSSSLKASG ALSSASDALH GLKFGQKIYF DDGGGGSGSS SKAPTAPAQE AAPPTKKGKG  60
VAQAGQQQPP RCQVEGCNVD LTGVKAYYCR HKVCGMHSKA PKVVVAGLEQ RFCQQFHQLP  120
EFDQGKRSCR RRLAGHNERR RKPPPGPFAS RYGRLASSVH GQKHLDTAAS TLSCRYPFKH  180
AAFGCHANMV CFTEDPSRFR SFLMDFTYPY LSSTARNLWP TARAGDRVAS NEWHVAFDTP  240
PGAAAMHGTH ACFQGPPAAT FCSPMEFPPG ECLGGVSDSS CALSLLSTHP WSSNSARNRA  300
PVIAPSSSTF DGPPMAQSAI PGNYGTSSWG LRGHGIRTNS SHEIQHATGA TEASDAHFLG  360
QVELALQENG QCLDHGSARA YAHSSLGMHW SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	1e-41	SBP family protein