PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV95294.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SBP

Protein Properties

Length: 274aa MW: 30393.6 Da PI: 10.4251

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV95294.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	66.5	5.5e-21	128	188	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +C++egC++dls ak+yhrrhkvCe+hska+vv+v gl+qrfCqqCsr +rLa+hn+rrrk+ RWV95294.1 128 RCKAEGCKTDLSGAKHYHRRHKVCEIHSKATVVAVGGLQQRFCQQCSR---------------KRLADHNRRRRKP 188 6*********************************************95...............7888888888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MNRFSSAGAF VPSMTSFAGM EGSSQKHYTW NWETNSHNLQ NHAFFPCTPL LDCPPTLVPA 60 NGFHFFSPPP PPEYPMGLVK RDDGGSGCGR IGLNLGHRTY FLSGDAPAVD RLLARSRGIH 120 SLSSHQPRCK AEGCKTDLSG AKHYHRRHKV CEIHSKATVV AVGGLQQRFC QQCSRKRLAD 180 HNRRRRKPPL PPTITSPSMN TNTDASEKAK QAQKTTGNYG DNRVLLLLLR SASDTLASLV 240 LMHLYHSLEQ QTRLAPQIQA TRLRDSSVRT KPIC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	183	210	RRRRKPPLPPTITSPSMNTNTDASEKAK
2	184	211	RRRRKPPLPPTITSPSMNTNTDASEKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	2e-36	SBP family protein