PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV95355.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 397aa MW: 44735.5 Da PI: 5.8276

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV95355.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.4	5.9e-19	92	145	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t eq+++Le+ Fe+ +++ e++ +LA+ lgL+ rqV +WFqNrRa++k RWV95355.1 92 KKRRLTVEQVRTLEKNFEQGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 145 45689************************************************9 PP
2	HD-ZIP_I/II	130.1	8.9e-42	91	181	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqv++LE++Fe+ +kLeperK++lar+Lglqprqva+WFqnrRAR+ktkqlEkdy++Lkr+++a+k+ene+L++++++L++e+ RWV95355.1 91 EKKRRLTVEQVRTLEKNFEQGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSENEALRAQNQKLHAEV 181 69*************************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MSCNGMASSS SSFFSPYYVI HMQTPHEEEH QLPAAVAALL HNTPCNSLED LRGKLVTHIQ 60 APRSLSFSGV ENGDEMHADD DLSDDGMQTG EKKRRLTVEQ VRTLEKNFEQ GNKLEPERKM 120 QLARALGLQP RQVAIWFQNR RARWKTKQLE KDYDVLKRQF EAMKSENEAL RAQNQKLHAE 180 VLVNSHLSSL VDKHCFFEND DPMMVSRTAS FVVASSYLSP FMFLKAAIGI LTSALDFYFV 240 LHVRIIELEL ELAILLSFVL FLFFGENICF TSGGCIYNAQ ISALKGREAP ELINLNKETE 300 GSCSNRSENS SEINLDISRT SVTESPLNPH HSLPPPFVHS IRPADMDQQL LGSSSRPEMQ 360 SPKIETGATE GSFSTLLCGL EDQSASFWPW SDHHNFH

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MSCNGMASSS SSFFSPYYVI HMQTPHEEEH QLPAAVAALL HNTPCNSLED LRGKLVTHIQ  60
APRSLSFSGV ENGDEMHADD DLSDDGMQTG EKKRRLTVEQ VRTLEKNFEQ GNKLEPERKM  120
QLARALGLQP RQVAIWFQNR RARWKTKQLE KDYDVLKRQF EAMKSENEAL RAQNQKLHAE  180
VLVNSHLSSL VDKHCFFEND DPMMVSRTAS FVVASSYLSP FMFLKAAIGI LTSALDFYFV  240
LHVRIIELEL ELAILLSFVL FLFFGENICF TSGGCIYNAQ ISALKGREAP ELINLNKETE  300
GSCSNRSENS SEINLDISRT SVTESPLNPH HSLPPPFVHS IRPADMDQQL LGSSSRPEMQ  360
SPKIETGATE GSFSTLLCGL EDQSASFWPW SDHHNFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	140	148	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-57	HD-ZIP family protein