PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV95460.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

YABBY

Protein Properties

Length: 357aa MW: 38659.3 Da PI: 8.388

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV95460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	28.6	4.6e-09	17	39	6	28
YABBY 6 sseqvCyvqCnfCntilavsvPs 28 seq+Cyv+CnfC+t+lav+ Ps RWV95460.1 17 PSEQLCYVHCNFCDTVLAVTHPS 39 68*****************9885 PP
2	YABBY	51.2	5.2e-16	52	109	17	74
YABBY 17 fCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeellee 74 +C + vsvP+tslfk+vtvrCGhCt+llsvn++ a + hl+++ + +++ RWV95460.1 52 HCCYLRQVSVPYTSLFKTVTVRCGHCTNLLSVNMRGLLLPAANQLHLSHACLTPAHHN 109 6777789************************988887777777777777766665555 PP
3	YABBY	88.1	2.3e-27	268	311	116	159
YABBY 116 irPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaakn 159 PekrqrvPsaynrfik+eiqrika+nPdi+hreafsaaakn RWV95460.1 268 CAAPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKN 311 567****************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MSSSSAAFSL DHLAPPPSEQ LCYVHCNFCD TVLAVTHPSP LPIPSRLGLP SHCCYLRQVS 60 VPYTSLFKTV TVRCGHCTNL LSVNMRGLLL PAANQLHLSH ACLTPAHHNL LVRTSPAPAL 120 PSPPSLLPGD ELQCPPPSLL LDPSILCSGN ANNGGNLVHS TATVNHNDSN CSTTAPVKGA 180 EEELPRSPVV NRREIPSLRF PGPYHRFPFA HTFFSPPFCF VPSDDPVHIT QLFTTIHANI 240 SNSSKWLRII TAFVLSTTVV IISMMVRCAA PEKRQRVPSA YNRFIKDEIQ RIKAGNPDIT 300 HREAFSAAAK NGLKKASVRQ APVSEGDRKA TTPEGEDVLP KEGFYATAAA NMGVTPF

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MSSSSAAFSL DHLAPPPSEQ LCYVHCNFCD TVLAVTHPSP LPIPSRLGLP SHCCYLRQVS  60
VPYTSLFKTV TVRCGHCTNL LSVNMRGLLL PAANQLHLSH ACLTPAHHNL LVRTSPAPAL  120
PSPPSLLPGD ELQCPPPSLL LDPSILCSGN ANNGGNLVHS TATVNHNDSN CSTTAPVKGA  180
EEELPRSPVV NRREIPSLRF PGPYHRFPFA HTFFSPPFCF VPSDDPVHIT QLFTTIHANI  240
SNSSKWLRII TAFVLSTTVV IISMMVRCAA PEKRQRVPSA YNRFIKDEIQ RIKAGNPDIT  300
HREAFSAAAK NGLKKASVRQ APVSEGDRKA TTPEGEDVLP KEGFYATAAA NMGVTPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45190.1	1e-29	YABBY family protein