PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV95700.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family NF-YC
Protein Properties Length: 183aa    MW: 20908 Da    PI: 6.5003
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV95700.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC44.92.5e-144380135
       NF-YC  1 qlksfwekq...iekatdfknhelPlarikkilkaded 35
                ql+ fw++q   ie++tdfknh+lPlarikki+kaded
  RWV95700.1 43 QLQLFWADQyreIEQTTDFKNHSLPLARIKKIMKADED 80
                89*****99999*************************9 PP
2NF-YC37.74.4e-127911169101
       NF-YC  69 nkrrtlkksdiaaavtrtdifdflvdivprdel 101
                  +rrtl+k+diaaa++rtd+fdfl+divpr+e 
  RWV95700.1  79 EDRRTLQKNDIAAAISRTDVFDFLIDIVPREEE 111
                 579***************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MDQPGHATPP LMGVAAGVPY AGGGPYQAYQ HLFHQQQQQQ QQQLQLFWAD QYREIEQTTD  60
FKNHSLPLAR IKKIMKADED RRTLQKNDIA AAISRTDVFD FLIDIVPREE EKEDVARPLG  120
APPTDPMSYY YVQHSINYVL FDKTNPKDLL VMWPVLVMGC VAQHCPIQFL VCLATSLCHV  180
KHC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18187RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.12e-31NF-YC family protein