PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV95723.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 211aa    MW: 23411.6 Da    PI: 10.7294
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV95723.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.57.3e-28956148
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                krien++ rqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+l+e
  RWV95723.1  9 KRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLFE 56
                79********************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MGRGKIEIKR IENTTSRQVT FCKRRNGLLK KAYELSVLCD AEVALVVFSS RGRLFEKRER  60
VEYGERTGLR HQWGECTGTE LCLGRLQKRS GERGRREKTA GLVSSRPGQK IDELCHCTAD  120
KGHHDATLAQ RGRGRGSGSG SAANHAWDHT PTWPTGTNRI LEETKVPGQV RRDAERRTGR  180
KGALGNGEID LVFALTSDPV LHLISKRVLG A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09960.22e-32MIKC_MADS family protein