PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV95861.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 313aa    MW: 35520.7 Da    PI: 8.2067
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV95861.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.93.5e-084262526
                --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                 C f+++ G C yG+rC+++H+
  RWV95861.1 42 ACTFYQK-GLCIYGSRCRYSHV 62
                6******.*************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MTFSDILLSQ PRVLCKYFAH GTCLKAEYCE FSHDWRDRSN KACTFYQKGL CIYGSRCRYS  60
HVGVSCHETS DPASSISHQA SSSSQVACPS RASLSRETTQ AFRIPLNLPA SSQSHIRPCE  120
HAQTQKTCCI CELLSSGKRE EHSTIGQKQN KLLETLKYSQ EIECSICLEI VLFKPTDAER  180
KFGILSECDH PFCISCIRNW RRNSPACGID LNTALRACPV CRKHSYFVVP SVTWFSTKEE  240
KQAIIDTYKD KLKSIDCKYY DFGNGTCPFG TSCFYKVHMV YTLTFMTWVL HAYASVSHGY  300
HMSLSLIMGN LFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08505.17e-88C3H family protein