PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV96313.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 223aa MW: 23997.3 Da PI: 8.1535

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV96313.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	140.8	4.3e-44	16	115	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC++dCv+apyfp +qp+kf vh++FGasnv+kll+++++++reda++sl+yeA++r+rdPvyG++gvi+ lq+ql+ql+ +lal+ + RWV96313.1 16 PCAACKFLRRKCQPDCVFAPYFPPDQPQKFVQVHRVFGASNVTKLLNEVHPDQREDAVNSLAYEADMRLRDPVYGCAGVISVLQHQLRQLQLDLALAMS 114 7********************************************************************************************999876 PP DUF260 100 e 100 e RWV96313.1 115 E 115 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MVSVAAASSP STASSPCAAC KFLRRKCQPD CVFAPYFPPD QPQKFVQVHR VFGASNVTKL 60 LNEVHPDQRE DAVNSLAYEA DMRLRDPVYG CAGVISVLQH QLRQLQLDLA LAMSELSRYQ 120 SVAAAAAGHR FTDVNLPIRA AGIGFGLEHF LPLTTRDANH HQHTMVRNCD ADTLVAKLGA 180 SSGYVTGRAA AWTTSASSLM PLHGQFTKPS TAGVDERPAI APL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	2e-55	LBD family protein