PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV96315.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 146aa    MW: 16430.2 Da    PI: 11.7788
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV96315.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.89.4e-3190140151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                 krien++ rqvtf+kRrng+lKKA+ELSvLCdae+a+i+fss+g+lyeys+
  RWV96315.1  90 KRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEIALIVFSSRGRLYEYSN 140
                 79***********************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MGRLFPTPTA RRRRTAQLMM VKAIRGDKLT GAGFLPKSRA EGSRVFLDLR TSMYSSRKQI  60
PAGFVLLVVL SSNPSIERKG NMGRGKIEIK RIENNTSRQV TFCKRRNGLL KKAYELSVLC  120
DAEIALIVFS SRGRLYEYSN NRSLSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09960.21e-36MIKC_MADS family protein