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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWV96487.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | ERF | ||||||||
| Protein Properties | Length: 220aa MW: 23098.3 Da PI: 10.3523 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 63.1 | 6e-20 | 21 | 70 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +gr++AeIrdp k+ r++lg+f+taeeAa+a++ a+++++g
RWV96487.1 21 RYRGVRQRP-WGRYAAEIRDPA---KKCRVWLGTFDTAEEAARAYDTAARRFRG 70
69*******.**********84...36*************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 220 aa Download sequence |
MAPRVKAANG CGGGGEWKGA RYRGVRQRPW GRYAAEIRDP AKKCRVWLGT FDTAEEAARA 60 YDTAARRFRG PKAKTNFPCP LDPLGSAPAA PAVVTIAAVH GAGAAASSSP SVSTVESSTP 120 SRKRAALDLE FRHPPARFPF AHYLPAAARP LVFFDPLAAS KKAAAARPVG LPGLRDLRAP 180 VCGGVESDSD SSSVVDCPGT PTGRIRFELD LNLPPPSEVA |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G28370.1 | 5e-23 | ERF family protein | ||||




