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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWV96699.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | HB-other | ||||||||
| Protein Properties | Length: 111aa MW: 13154.1 Da PI: 10.8354 | ||||||||
| Description | HB-other family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 25.4 | 2.4e-08 | 55 | 88 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54
k +yp+++++++L +++gL +q+ +WF N+R +
RWV96699.1 55 KWPYPTEDDKARLVQETGLHLKQINNWFINQRKR 88
469*****************************87 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 111 aa Download sequence |
MTVYLCQIKQ ESLPAKGYKE KLVDIREEII RKRRAGKLPG DSTSLLKAWW QSHSKWPYPT 60 EDDKARLVQE TGLHLKQINN WFINQRKRNW HSNPSSSSTM KSKRKRFAIN D |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 86 | 106 | RKRNWHSNPSSSSTMKSKRKR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G25220.2 | 9e-48 | TALE family protein | ||||




