PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV96802.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 389aa MW: 42793.6 Da PI: 5.8724

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV96802.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.1	2.8e-12	179	230	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ RWV96802.1 179 QRMTHIAVERNRRRQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 230 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
ANNPAGFATA APQESSENSI EMVNYMLSNP APQTQISFDK LSFADVMQFA ELGPKLALHQ 60 SKASEEENYF LKFQMLGDKL HDDALMASAS PSSHLPLLPP PLVVGAGEDR FGGTSLEHRA 120 GMLAEEDGEK KARSSENASS VQHLHLVGQT DKAAAGVVEA KNRRKRPRAL KTSEEVESQR 180 MTHIAVERNR RRQMNEHLRV LRSLMPGSYV QRGDQASIIG GAIEFVRELE QLLQCLESQK 240 RRRLFGGVEA PRSAMDAPPL PNQQQPFYPP LPFPNADQVK LLDIDPSGGG GLLEETAESK 300 SCLADIEVRL LGFDAMIKIL SRRRPGQLIK TIAALEDLQF AILHTNITTI EQTVLYSFNV 360 KIASETRCTA EDIANSVQQI LSFIDANTV

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

ANNPAGFATA APQESSENSI EMVNYMLSNP APQTQISFDK LSFADVMQFA ELGPKLALHQ  60
SKASEEENYF LKFQMLGDKL HDDALMASAS PSSHLPLLPP PLVVGAGEDR FGGTSLEHRA  120
GMLAEEDGEK KARSSENASS VQHLHLVGQT DKAAAGVVEA KNRRKRPRAL KTSEEVESQR  180
MTHIAVERNR RRQMNEHLRV LRSLMPGSYV QRGDQASIIG GAIEFVRELE QLLQCLESQK  240
RRRLFGGVEA PRSAMDAPPL PNQQQPFYPP LPFPNADQVK LLDIDPSGGG GLLEETAESK  300
SCLADIEVRL LGFDAMIKIL SRRRPGQLIK TIAALEDLQF AILHTNITTI EQTVLYSFNV  360
KIASETRCTA EDIANSVQQI LSFIDANTV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	180	191	RMTHIAVERNRR
2	240	244	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-112	bHLH family protein