PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV96913.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family SBP
Protein Properties Length: 247aa    MW: 27202.8 Da    PI: 8.1447
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV96913.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP66.17.4e-21136184149
                 --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSE CS
         SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrf 49 
                 +Cqv+gCead+se+k yh+rh+vC  ++++++v+++g+++r+CqqC++ 
  RWV96913.1 136 RCQVPGCEADISELKGYHKRHRVCLRCANSSSVVLDGEHKRYCQQCGKR 184
                 6*********************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MEIPPASAVE PIPMAADEPT AAAAMWEWGS LFDFTVVDED PLILPWGTSD EAQTLPPLST  60
AELSSLPLPP AEPAPSAIED GMGRVRKRDP RLVCPNYLAG RVPCSCPEED EQAMQEVAVA  120
GSRKRSRKGG ASRVVRCQVP GCEADISELK GYHKRHRVCL RCANSSSVVL DGEHKRYCQQ  180
CGKRRGRRKN LEFDVALRSW AISSPASNFF ARAGRRNVSP RGEKERGDIA ERTWAYRSVP  240
VYHTVSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18830.22e-37SBP family protein