PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV96967.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 227aa    MW: 26175.5 Da    PI: 9.5882
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV96967.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF49.64.9e-161152344
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                i n+  r  t+ kRr+g++KK  ELS+LC++e++v+++ ++ 
  RWV96967.1 11 IVNDATRRATLKKRRKGLIKKVRELSILCGVEACVVVYTPHE 52
                679999*******************************98753 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MARNKVKLAW IVNDATRRAT LKKRRKGLIK KVRELSILCG VEACVVVYTP HENQPVTWPS  60
LPEAAEMMAR FKSMPEIERS RKMVNQETFL HLRIAKLLEQ LRRQQRENRE IEMTWLTWEG  120
FHGRSFDDLG VEDASALAWS VDTKLKEVND RRELLLKRLT MAPPPPPMPV APAAAVTGMM  180
PMPMERQGHP AEGSQRPNWL MDMMSPWSDE GQMYVDPISS WPDSLFP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12226KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.12e-27M-type_MADS family protein