PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV97123.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family NF-YC
Protein Properties Length: 162aa    MW: 18529 Da    PI: 5.6438
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV97123.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC173.81.8e-54361391101
       NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 
                 ql++fw++q   ie++tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt rsw haeenkrrtl+k+diaaa++rtd+fdfl+div
  RWV97123.1  36 QLQMFWADQyreIEQTTDFKNHSLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRSWAHAEENKRRTLQKNDIAAAISRTDVFDFLIDIV 134
                 89*****99999*************************************************************************************** PP

       NF-YC  97 prdel 101
                 pr+e 
  RWV97123.1 135 PREEG 139
                 **985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MIGVATGVPY AAASAGGPYQ AYQHLYQQQQ QQQQQQLQMF WADQYREIEQ TTDFKNHSLP  60
LARIKKIMKA DEDVRMIAAE APVVFARACE MFILELTHRS WAHAEENKRR TLQKNDIAAA  120
ISRTDVFDFL IDIVPREEGK EDVARPLGAP PGDPLSYYYV QQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109115RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.11e-65NF-YC family protein