PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV97307.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 274aa MW: 30171 Da PI: 7.8189

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV97307.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.4	2.2e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l + ++++G+g +W + +++ g++R++k+c++rw++yl RWV97307.1 14 RGPWSPEEDAVLRNHIEEFGNGgNWIALPKKAGLNRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	27.9	5.6e-09	67	116	18	46
HTTTT......................-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 18 qlGgg......................tWktIartmgkgRtlkqcksrwqk 46 q+G++ +W+ Ia+++ gRt++++k++w++ RWV97307.1 67 QHGNEsptlvsttplmspkrvpqislfRWSVIASHLR-GRTDNDVKNYWNT 116 6777777888888888888888888889*******.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MGRAPCCDKA NVKRGPWSPE EDAVLRNHIE EFGNGGNWIA LPKKAGLNRC GKSCRLRWLN 60 YLRPDIQHGN ESPTLVSTTP LMSPKRVPQI SLFRWSVIAS HLRGRTDNDV KNYWNTKLKK 120 KMMMTPTIIT SNIPSPTPAS LLPTVKAEHY NPSDTSRPVD PIFALTRDSH KFYSEPSPLP 180 RECRANATGQ FMCPSGEVSA TSSTFTVDDG SSNSYGNWSA VGAGADDLFL SELDFGYLAD 240 LLGDDGSQAE MPQGLYRSVV YSVAKGIVLR SDDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36890.1	1e-51	MYB family protein