PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV97308.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 237aa    MW: 25869.2 Da    PI: 9.2229
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV97308.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.42.2e-074365426
                ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  4 elCrffartGtCkyGdrCkFaHg 26
                +lC++f+r+G C++G++C  aHg
  RWV97308.1 43 SLCPDFRRGGGCRRGESCDLAHG 65
                79****************88887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
RMYEFKVRRC PRGRSHDWTE CPYAHPGEKA RRRDPRRFHY SGSLCPDFRR GGGCRRGESC  60
DLAHGVFETW LHPARYRTQP CKDGAACRRR VCFFAHSPEQ LRVLLPPSPT SPGKGGARVS  120
SSPTSTLALA PMSPPSDGSS PPVSPVGLDE VIQAMSNLHL SKVRSRPPFG ARRSAAALGS  180
APLVAEVAVA NAWGAAAAAA AWGSRSKLLE CWRRQEEEEE AAEAVPDLGW VTDLVND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.14e-55C3H family protein