PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV97415.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 278aa MW: 30278.3 Da PI: 4.3479

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV97415.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.1	3.4e-19	47	100	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++++eq+++Le+ Fe ++++ e++ +LAk+lgL+ rqV vWFqNrRa++k RWV97415.1 47 KKRRLSAEQVRALEKNFEVENKLEPERKVRLAKELGLQPRQVAVWFQNRRARWK 100 45689************************************************9 PP
2	HD-ZIP_I/II	128.4	3e-41	47	136	2	91
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 kkrrls+eqv++LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkql +dy+aLk++ydal+ + ++L++++e+L ++ RWV97415.1 47 KKRRLSAEQVRALEKNFEVENKLEPERKVRLAKELGLQPRQVAVWFQNRRARWKTKQLAHDYAALKASYDALRLDFDSLHRDKESLVSQA 136 9*************************************************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MTSWLAGEDQ EDVYGGDFHP IMEGLDEDDG GDEELCAAAA AAVGGAKKRR LSAEQVRALE 60 KNFEVENKLE PERKVRLAKE LGLQPRQVAV WFQNRRARWK TKQLAHDYAA LKASYDALRL 120 DFDSLHRDKE SLVSQAKLAE NEGLSLSFSS SAKEGPAVPE IAAKAPESED PPAAICKDGS 180 SSSDSSAVVN DAAIANDENS PQLTTASDMF SAATAGASGE LGSDSSMLLN SDSRPRFFCQ 240 HHEILKMEEA ELLGEPCGSF FSDEQAATLN WYYSDHWN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	95	103	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G40060.1	3e-46	HD-ZIP family protein