PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV97509.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 255aa MW: 29391.6 Da PI: 4.5715

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV97509.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.1	8.2e-20	45	99	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++t eq++ Le+ Fe+++++ e++ eLA+klgL+ rqV vWFqNrRa++k+ RWV97509.1 45 KKRRLTLEQIHLLERNFEEENKLEPERKSELARKLGLQPRQVAVWFQNRRARWKN 99 56689************************************************95 PP
2	HD-ZIP_I/II	127.9	4.3e-41	44	136	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ eq++lLE++Feee+kLeperK+elar+LglqprqvavWFqnrRAR+k+kqlE+++++L+++ydal +++++L k++++Lr+++++ RWV97509.1 44 EKKRRLTLEQIHLLERNFEEENKLEPERKSELARKLGLQPRQVAVWFQNRRARWKNKQLEREFDQLRSSYDALLADHNALLKDNDRLRSQVNS 136 69***************************************************************************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MFWGGTEGVR SVVAGEDGGA SKRRPFFTSP DEIYEEYYEE QMPEKKRRLT LEQIHLLERN 60 FEEENKLEPE RKSELARKLG LQPRQVAVWF QNRRARWKNK QLEREFDQLR SSYDALLADH 120 NALLKDNDRL RSQVNSLIEQ LQAKEQGASE VVQGEQAASS ADLMALKVQQ KVELSTGSGR 180 SAVVVETEGT NQLEESRRQS SLPATYHGVG LVDCGIRTED DDLSDEGCSY YPDAMLMELQ 240 HQEEAHLPWW EWDQM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	93	101	RRARWKNKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	1e-59	HD-ZIP family protein