PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV97616.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 300aa MW: 32605.2 Da PI: 8.1568

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV97616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.7	6.6e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv++++++G g+W+ ++ g++R++k+c++rw +yl RWV97616.1 14 KGPWTPEEDKKLVEYIQRHGHGSWRNLPKNAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	57.1	4e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E++++++++ lG++ W+tI+r+++ gRt++++k++w+++l RWV97616.1 67 RGKFSEDEEQIIIHLHSILGNK-WSTISRRLP-GRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MGRPPCYDEM GVKKGPWTPE EDKKLVEYIQ RHGHGSWRNL PKNAGLNRCG KSCRLRWTNY 60 LRPDVKRGKF SEDEEQIIIH LHSILGNKWS TISRRLPGRT DNEIKNYWNT HLKKKLLLMG 120 VDPVTHAPRT DLDLLALLPV LLAAATGLGN LGSSRNHVRG LQSDPVHLVR LGVIQTLIQA 180 MTSSPSNAAM NPLGSASLGF AQLNQQLVGL APDLSAVAAN PSGSSFQTGT KTESCSGIAV 240 PVAFSSCAVP ASPSTHPPIS IPQESAPMDS PASIPFEDWH GLSLGESNAD DMICWKDIIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	1e-76	MYB family protein