PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV97870.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 346aa    MW: 36076.6 Da    PI: 6.2374
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV97870.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.42.4e-08251271526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                 +C +far G+Ck G  C+F Hg
  RWV97870.1 251 PCLYFAR-GYCKNGTACRFLHG 271
                 8******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MDAYDATRIV LSRIQSLDPE NAPKIMGLLL LQEHGENEMI RLAFGPETLL HSVVLKAKKE  60
LGLAPPSSAP GTPPVAGGAA SPFLLRQKSA SRLLSGGLPP PPLTVSSPSS WAPPSVFSGS  120
NNSGGGNGLN VPLDKLLNSD ELICPGSLGV SPFYGCGGDL IDEFRLPDQL SLVGDPTAAA  180
TPNHSLSLAS SPGSGDVFRA DVECRSPSSN GDGALFPNGL DWGVNGYHHR RSCSAADLSL  240
GDAAAGFGWK PCLYFARGYC KNGTACRFLH GLPEEAAGTK MDAVVEQQCQ ELLLRSKSQR  300
IGGASQLVAS AFPYSPTGSM PPSPSSSSSS KCLSFLLQQQ QNDSQR