PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV98032.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 295aa MW: 33313.4 Da PI: 4.8647

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV98032.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.4	4.9e-18	90	142	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + ++ eq+++Le+ Fe+ +++ ++ eLA+ lgL+ rqV +WFqNrRa++k RWV98032.1 90 KKRLDLEQVRVLEKNFEMGNKLEPGRKMELARALGLQPRQVAIWFQNRRARWK 142 4557789*********************************************9 PP
2	HD-ZIP_I/II	124.9	3.6e-40	88	178	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekk+rl eqv++LE++Fe+ +kLep rK+elar+Lglqprqva+WFqnrRAR+ktkqlEkdy+ Lkr+++a+k+ene+L++ +++L +e+ RWV98032.1 88 EKKKRLDLEQVRVLEKNFEMGNKLEPGRKMELARALGLQPRQVAIWFQNRRARWKTKQLEKDYDELKRQLEAMKTENEALQARNKKLLSEV 178 69*************************************************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MPPLFPANLL LQIPHDETSP PGFGGQRPYL ASYPQDLTLG LLSNDCVGAA TVETLLGKRS 60 VSFSRMEACE ELNMEEDLSD DGSQPASEKK KRLDLEQVRV LEKNFEMGNK LEPGRKMELA 120 RALGLQPRQV AIWFQNRRAR WKTKQLEKDY DELKRQLEAM KTENEALQAR NKKLLSEVGI 180 AMNGSDPSNE LCLSDATLLA LKGKETSEPI NLNKETEGSC SFRSDNSSDI NLDLSTSDPH 240 KSRVFFPSYR PPPTKTETAK EEHSSIQEEN LCTMFCSTDD QSAFWAWSEQ HNFHQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	137	145	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	5e-72	HD-ZIP family protein