PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV98357.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 335aa MW: 35917.8 Da PI: 9.8934

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV98357.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.9	7.5e-38	58	191	2	113
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........... 88 a+ +++++++hTkv+gR+RR+R++ +caar+F+L++eLG+++d++tieWLlqqa+pa++++tg+++++a+++ s + s+s+ s + RWV98357.1 58 APTRSSTKDRHTKVDGRGRRIRMPTLCAARVFQLTRELGHKSDGQTIEWLLQQAEPAVIAATGSGTIPANFTsLGISLRRSGSSISTPpdfntttsplt 156 78999***********************************************************99999888644555555542222255556667777 PP TCP 89 .....................kaaksaakskksqksaasalnlake 113 + ++s++ ln++ RWV98357.1 157 dqriwdyvgssdfssdwrsssS-----------SSSSSVLLNFNSG 191 7777788875555555554321...........2222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MEGDAGGRRR PNFPLQLLEK KEENSYSTSG YASFAISPNP AAGGSGHELV ADLPRKPAPT 60 RSSTKDRHTK VDGRGRRIRM PTLCAARVFQ LTRELGHKSD GQTIEWLLQQ AEPAVIAATG 120 SGTIPANFTS LGISLRRSGS SISTPPDFNT TTSPLTDQRI WDYVGSSDFS SDWRSSSSSS 180 SSSVLLNFNS GSVGLHASSD TNNENISKRW WESEFHHQQQ HQMEQRNQAS HGRIPGTAWM 240 MTNPNTQGMV GGGGSDGEPI WALPQVGSST MFRGSMSSGL HLMKSPTSMA LLPSRELGLH 300 PGGSGGGEGH MRVMAAPDST SRPPNTSQAM RSGPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	1e-47	TCP family protein