PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV98429.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 234aa MW: 26228.8 Da PI: 8.4397

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV98429.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.5	5.4e-06	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H RWV98429.1 6 FVCEICNKGFQRDQNLQLHRRGH 28 89*******************88 PP
2	zf-C2H2	12.6	0.00041	82	104	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +++ RWV98429.1 82 WKCDKCSKKYAVQSDWKAHSKVC 104 58*****************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLRQRTGK EPRKRVYVCP EPSCVHHDPS 60 RALGDLTGIK KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH SKVCGTREYR CDCGTLFSRY 120 FDEHLRCMTS RYSFITHRAF CDALAEESAK KGPGAPTSDP KPPAEEEKAT ATEEATAAEE 180 ATEAAVETAP AAVVAAPLPP QQVDPLELQG WWLSVSIPSC SSLSDCGRML LAHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	4e-80	C2H2 family protein