PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV98458.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 777aa    MW: 84388.8 Da    PI: 7.4523
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV98458.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS347.81.7e-1062496222374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn.sseelaalklfsevsPilkfshlta 98 
                  e Ll+cA+ ++++d +la++ L +++e as+ gdp++R+a+yf+eAL++rl++ + ++   + +p++ s ++  +e +  +k++++++P++kf+hlta
  RWV98458.1 249 LESLLQCAR-LADSDPHLATKSLIHVRESASELGDPTERVAFYFAEALHRRLLEaQRKHPLPTSAPQPPSFDSsPEEFTLCYKVLNDACPYFKFAHLTA 346
                 578******.667799*************************************94333333333333333333478888999***************** PP

        GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 NqaI ea+e++ r+Hi+Df+i qG+QW+aLlqaLa+Rp+g+p ++Ri g+ +p+ + + +l +tg+rL++fA+ l+++fef+  + + + ++  +++rv
  RWV98458.1 347 NQAIIEATESAGRIHIVDFGIVQGIQWAALLQALATRPSGKPsKVRISGIPAPALSGAASLAATGNRLRDFAALLDLDFEFDS-ILTPIPEIAASTFRV 444
                 **************************************777769***************************************.799************ PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +p+E ++Vn++lql +ll   ++++++ ++vL++ ksl P+++++ e  a++n++ F++rf  al+yy+a+f+sle  ++r++ er+ vEr l+g +i 
  RWV98458.1 445 DPDELVVVNFMLQLSHLL---GDSPEPVERVLRVAKSLGPRILTLGEFGASLNHGCFVDRFGAALDYYAAVFESLEPAMGRDAPERARVERLLVGLQIL 540
                 ******************...555556669********************************************************************* PP

        GRAS 296 nvva.cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve.eesgslvlgWkdrpLvsvSaWr 374
                  +v   eg++rr r+  +e+Wr  +e++GF++ pls++a++qaklll +++ s  y++  +   +l+l W drpL++vS+Wr
  RWV98458.1 541 GAVGpFEGQNRRVRMAAKEEWRVVMERCGFSSFPLSNYAVSQAKLLLWNYNySSRYTLLdSPPPCLTLAWGDRPLLTVSSWR 622
                 ***84699*******************************************9888998725699*****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 777 aa     Download sequence    
MAYMCADSGN LMAIAQQVIQ QQQQQQQQQQ QQRHQQQQPQ LVASVNPFSA SPSPWASHHQ  60
HQHVPDHFPF VIPDSAAAFA DPFASDPIPG FPPPGGDGGR HLDHGHFRMS DFGSSAATVA  120
AEFDSDEWME SLIGESPAES SVLMSEPWPS ATECAGALFV DAFPSCSADI SLPSPAPAAS  180
DLNRVFFSEP SKIPPLALVQ HHQAAAVVAS NPPAAQVPAC DPPEPKKNCG AATVRKQARE  240
RSISSPPLLE SLLQCARLAD SDPHLATKSL IHVRESASEL GDPTERVAFY FAEALHRRLL  300
EAQRKHPLPT SAPQPPSFDS SPEEFTLCYK VLNDACPYFK FAHLTANQAI IEATESAGRI  360
HIVDFGIVQG IQWAALLQAL ATRPSGKPSK VRISGIPAPA LSGAASLAAT GNRLRDFAAL  420
LDLDFEFDSI LTPIPEIAAS TFRVDPDELV VVNFMLQLSH LLGDSPEPVE RVLRVAKSLG  480
PRILTLGEFG ASLNHGCFVD RFGAALDYYA AVFESLEPAM GRDAPERARV ERLLVGLQIL  540
GAVGPFEGQN RRVRMAAKEE WRVVMERCGF SSFPLSNYAV SQAKLLLWNY NYSSRYTLLD  600
SPPPCLTLAW GDRPLLTVSS WRYFNFWLAG QMMHCGERVA SFSIEGCLAG ILYFCSIGRW  660
SKTGVAFFCV SSLLSGFKKL KSVPRQTLGR TRVGGSRIKR RLHASLPRTT GRSRGGHVQK  720
EAAQAMASRA SDSSRMPAVG GTQPHASDRA GRSRAGRSLV LPTAQATTTE EVRVFFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-129GRAS family protein