PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV98488.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 151aa    MW: 15997.5 Da    PI: 4.8606
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV98488.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH44.52.6e-14101124427
                 ---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHgp 27 
                 ++C+f+++tGtCk+G+ CkF H+p
  RWV98488.1 101 VICSFYMKTGTCKFGAACKFDHPP 124
                 79********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MSGLVTLLSV NDFCAKLQGS ETADISILPE RLSEPVCSGE PDCPFYLKTG RSVSSQQSIL  60
KGLGNWNVMV LKSAAVQSVS VAVPCLEVKL LIRPMSLQGA VICSFYMKTG TCKFGAACKF  120
DHPPPGEAIA MATIQGTAEG EETKDAPEVQ Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12680.13e-16C3H family protein