PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV98654.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 709aa MW: 77413.8 Da PI: 6.9982

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV98654.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	100.2	1.7e-31	77	161	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r+em+ ++r++ k+plWeevs+k++e g++rs+k+Ckek+en++k+yk++k+g+ +r ++ +t+++f+qlea RWV98654.1 77 RWPRQETLALLKIRSEMDAAFRDATFKGPLWEEVSRKLAELGYRRSAKKCKEKFENVHKYYKRTKDGRAGR--QDGKTYRFFNQLEA 161 8******************************************************************98..56667*****85 PP
2	trihelix	106.2	2.3e-33	448	533	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k+ev+aLi++r+ +++r++++ k+plWe++s+ m++ g++rs+k+Ckekwen+nk++kk+k+++kkr +e+s++cpyf++lea RWV98654.1 448 RWPKEEVHALIKLRSGLGSRYQEAGPKGPLWEDISAGMQRLGYSRSAKRCKEKWENINKYFKKVKDSNKKR-PEDSKSCPYFHELEA 533 8*******************************************************************8.999********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 709 aa Download sequence
PPAHVLQNPG AGPLHLPPHP SSQLVESAPT PVSRRPPAPT VAANFDVLAP AVVGDFHDDE 60 ALTVGYEAER GGTPGSRWPR QETLALLKIR SEMDAAFRDA TFKGPLWEEV SRKLAELGYR 120 RSAKKCKEKF ENVHKYYKRT KDGRAGRQDG KTYRFFNQLE ALHSSGGGGA TTPTVTTAMP 180 LTTTSPAQIS FTTAPAGPPA PRVQASSVSA AAPPPVATPS WVVPDLGPQA NSSLAAAGIS 240 FSSDSSSSSS SDSDDEETED AGESREGRKR KRRGGSRARQ QMMTFFQGLM RQVMERQEAM 300 QQRFLEAIEK REQDRLIRED AWRLQEMARL SREQELLSQE RAMAASRDTA VISYLQKISG 360 QPVTSSSAVP ATAAAISLTS LPLPQSHAPS PPQPPPKQQQ EHQQKQGDRH HTPKTDVTAH 420 QPSSATQRVT VSSEPEEGHC FEPVSSSRWP KEEVHALIKL RSGLGSRYQE AGPKGPLWED 480 ISAGMQRLGY SRSAKRCKEK WENINKYFKK VKDSNKKRPE DSKSCPYFHE LEALYRKKML 540 GSDIAAGDPG GGSSAVGQQK QEQDTKPSPL EQQQQRHPAV VEGQNGDNNK NNRSGGTPEA 600 GGGSTGVQVQ TSNGQHPPSF PDQEGTMKPE DIVKVLTEQR QPPSVMDEHY KVDKPSCDNL 660 DQDDDYEDDD DEVRYELQFQ RQISSGDAAI ATTAAATATA SGSFLAMVQ

Sequence ? help Back to Top

Protein Sequence Length: 709 aa Download sequence

PPAHVLQNPG AGPLHLPPHP SSQLVESAPT PVSRRPPAPT VAANFDVLAP AVVGDFHDDE  60
ALTVGYEAER GGTPGSRWPR QETLALLKIR SEMDAAFRDA TFKGPLWEEV SRKLAELGYR  120
RSAKKCKEKF ENVHKYYKRT KDGRAGRQDG KTYRFFNQLE ALHSSGGGGA TTPTVTTAMP  180
LTTTSPAQIS FTTAPAGPPA PRVQASSVSA AAPPPVATPS WVVPDLGPQA NSSLAAAGIS  240
FSSDSSSSSS SDSDDEETED AGESREGRKR KRRGGSRARQ QMMTFFQGLM RQVMERQEAM  300
QQRFLEAIEK REQDRLIRED AWRLQEMARL SREQELLSQE RAMAASRDTA VISYLQKISG  360
QPVTSSSAVP ATAAAISLTS LPLPQSHAPS PPQPPPKQQQ EHQQKQGDRH HTPKTDVTAH  420
QPSSATQRVT VSSEPEEGHC FEPVSSSRWP KEEVHALIKL RSGLGSRYQE AGPKGPLWED  480
ISAGMQRLGY SRSAKRCKEK WENINKYFKK VKDSNKKRPE DSKSCPYFHE LEALYRKKML  540
GSDIAAGDPG GGSSAVGQQK QEQDTKPSPL EQQQQRHPAV VEGQNGDNNK NNRSGGTPEA  600
GGGSTGVQVQ TSNGQHPPSF PDQEGTMKPE DIVKVLTEQR QPPSVMDEHY KVDKPSCDNL  660
DQDDDYEDDD DEVRYELQFQ RQISSGDAAI ATTAAATATA SGSFLAMVQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	268	273	RKRKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	8e-47	Trihelix family protein