PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV98702.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 158aa    MW: 17591.5 Da    PI: 10.2907
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV98702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF48.79.5e-162973145
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                k+ien  +r vtfskRr+g++  A EL+  ++a +av++fss+g+
  RWV98702.1 29 KKIENLERRAVTFSKRRKGLFAMAAELCACTGAHAAVVVFSSSGR 73
                68*****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MPSMEPALAM ASAVKSKRTS RGRQKIRIKK IENLERRAVT FSKRRKGLFA MAAELCACTG  60
AHAAVVVFSS SGRPYACSYP SVDEVLRRYL VGQFRERAGL ERMQEPVQMR ALLLGEGDER  120
AAELHRGAVL EELQRGVEEM EKLRWLVLAK ADLGGATE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36590.14e-20M-type_MADS family protein