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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWV98707.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | bHLH | ||||||||
| Protein Properties | Length: 161aa MW: 18089 Da PI: 5.1156 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 30.1 | 8.4e-10 | 65 | 94 | 2 | 30 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C CS
HLH 2 rrahnerErrRRdriNsafeeLrellPk.a 30
+ hn+ Er RR+++N+ ++ Lr llP+ +
RWV98707.1 65 KLCHNAYERDRRKKLNDLYSSLRALLPEsD 94
678************************955 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 161 aa Download sequence |
MLALSPHHFS PMGWQPEDIT AHDLHYEDPF ACYPYEEELE IGHDDLLRHC SVHAAKDDSS 60 SSTKKLCHNA YERDRRKKLN DLYSSLRALL PESDQAEEEE EAEHPIDHLP GLEVHTGAAK 120 AGREAVKEEG RDIAGVVEAR RTKPVCSKCS AVSHGFSNLF E |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G56970.1 | 7e-11 | bHLH family protein | ||||




