PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV98726.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 256aa MW: 27878 Da PI: 9.7345

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV98726.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0014	36	58	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F ++ +L H +H RWV98726.1 36 FVCNMCKREFGTSQSLGGHRASH 58 89**************9999888 PP
2	zf-C2H2	15.7	4.2e-05	157	176	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 y+C+ C++ F+++ L rH RWV98726.1 157 YRCSWCNREFTTWQALGRHR 176 9******************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MSSTLPSSSY SEAELEAAEA LPTLSRQDVA PRQRKFVCNM CKREFGTSQS LGGHRASHNG 60 EKGCYERARE RRENRRIDRT KRKRKRGSEA AGESEDDPVD AAAAPPAIHR EEARKCGPAA 120 DGSRPSQRMG KETMEMSEEA KPTEAAAAAE ASKDGRYRCS WCNREFTTWQ ALGRHRTNQK 180 GRKGCSEKAK EATEKIKSSE GKPIEAVAAA TPATSSPTVG SSVSTSTLTA EGTMEMTTRG 240 KKRRLLDLNL SPPASD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17180.1	9e-07	C2H2 family protein