PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV98728.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 287aa MW: 30197.9 Da PI: 9.032

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV98728.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.2	6e-05	82	103	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ C+k F + L+ H+r+H RWV98728.1 82 QCNVCNKAFGSVKALHGHMRSH 103 7********************9 PP
2	zf-C2H2	13.4	0.00023	143	165	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F+++ L H +H RWV98728.1 143 FVCSGCNREFPTRQALGGHRASH 165 89**************9999888 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MSAAHAPTAP GHPGSFAADD GDAGDDNGDD PSRDKRLKPA HTVDAEPIFS GDDDEEEQAD 60 DNADAPSPGR RPKQAEPVGP QQCNVCNKAF GSVKALHGHM RSHPLRKWRG ILPPSMRPGA 120 EQEVADSLLL LSGQEEAPRK RRFVCSGCNR EFPTRQALGG HRASHKSQKG CYERAKEARE 180 YGPRAGRRRA KKRGNKEPGP SEVKPTATLA TTAVGASTTM AAEGTTRTRR RGLDLNLLPA 240 SSDDTTGGNG NGNGNGNGNG NGNGNGSSTS SALAGQSHRD SSHKDSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17180.1	6e-23	C2H2 family protein