PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV98732.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 243aa MW: 26802.1 Da PI: 9.3192

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV98732.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.4	2.5e-13	139	199	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...........TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkas........kapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f eL ++P + ++ +K++Ka++L A++Y+k+Lq RWV98732.1 139 QEHIMAERKRREKLSQRFIELSAIVPGLKkltksrfmSPALGKMDKASVLSDAIKYLKQLQ 199 5799*********************878****************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MDHSFFGQWE LTALDHYSTP VALGRDLDQS PSSESYTSYP SSHPQASAVR PNKAIKTSSW 60 KSCATEQNSA PEASCPRILS FGNPESPICQ YGSHAAATGK TKEETDGSIP KGSKRNYDTM 120 FGDGTKSGNT GVRSASHNQE HIMAERKRRE KLSQRFIELS AIVPGLKKLT KSRFMSPALG 180 KMDKASVLSD AIKYLKQLQE NVKALEDQVA KRNVDSAVLT EEDFSMTAKD IVKKLNSAFR 240 EFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	145	150	ERKRRE
2	146	151	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-23	bHLH family protein