PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV98753.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family HSF
Protein Properties Length: 393aa    MW: 44046.6 Da    PI: 5.9753
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV98753.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.33.8e-36441352102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k y++++d+++++++sws+++nsfv++d++ f++++LpkyFkhsn++SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll++i 
    RWV98753.1  44 FLSKCYDMVDDPSTDDTVSWSKTSNSFVIWDPHAFSQDLLPKYFKHSNLSSFVRQLNTYGFHKVDPDK---------WEFANEGFLRGQKHLLKTIT 131
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
    RWV98753.1 132 RRKP 135
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
FGVFSFFLAR RTLLSPQQNR GGGATEARMA SGGGSSLVPA LPPFLSKCYD MVDDPSTDDT  60
VSWSKTSNSF VIWDPHAFSQ DLLPKYFKHS NLSSFVRQLN TYGFHKVDPD KWEFANEGFL  120
RGQKHLLKTI TRRKPAHNIV PQQQPRPKTQ SVNEVGNFGF KEEIEILKRD KNALMQELIK  180
VRQHQQNSEL ELHSLIQRIR HMEQKQLEMM SLLAMVVQTP NFIAQLVQQN VNDRWSNINK  240
RRRLPAPEHN ALDGAEAVLD GQIIKYQPFA PEIIKSSFLP VVNSKESGSL QHESSVFNDL  300
HPNGVSMTAG ADLALPLQEN GSLTNLEDLE QLLASSAGEN SEQIEPGALA EYMRSLDFTE  360
QDTDGCMGIL SAKNETEIGN PTSEKGSNDM VVW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1240244KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16820.26e-87HSF family protein