PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV99556.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HB-other

Protein Properties

Length: 394aa MW: 44508.2 Da PI: 5.6413

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV99556.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.2	6.6e-19	53	108	1	56
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r++ +++t++q+++Le++F+++++p+ ++r eL ++lgL+ qVk+WFqN+R++ k RWV99556.1 53 RKRHHRHTTDQIQRLEAFFKECPHPDDRQRNELGRELGLEPLQVKFWFQNKRTQIK 108 567789**********************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MLEDQEQDDL LDDQMMDQLI PDADEDFANT PGSEPVEGGS EDELQDNGSR GKRKRHHRHT 60 TDQIQRLEAF FKECPHPDDR QRNELGRELG LEPLQVKFWF QNKRTQIKVC LLLLLLRVPP 120 TKNLMSKPYI RHHRTSLPLF AHTHSLASCM QNQSEREENQ RLKDENDRLL SENLRLKEAL 180 SGACCPNCGG PPHLGEMSID EQELQAENAR LQDEVRTPHN RRPEMGRRTG LALAQVAAEE 240 LLAMSQLGEP IWTWGSDGFR ETLNQEEYAR AFPGGLGPKM AGLRTEASRE TAVVRMDAGR 300 LVDILMDVLA ERMVVSFCSG VSGSVAHHWT NISGTVADPV RIRSRNNDGV PGRPPGVVLN 360 ASTSIWLPVT PKRVFELLRS ESLRNEVFRV PEIV

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MLEDQEQDDL LDDQMMDQLI PDADEDFANT PGSEPVEGGS EDELQDNGSR GKRKRHHRHT  60
TDQIQRLEAF FKECPHPDDR QRNELGRELG LEPLQVKFWF QNKRTQIKVC LLLLLLRVPP  120
TKNLMSKPYI RHHRTSLPLF AHTHSLASCM QNQSEREENQ RLKDENDRLL SENLRLKEAL  180
SGACCPNCGG PPHLGEMSID EQELQAENAR LQDEVRTPHN RRPEMGRRTG LALAQVAAEE  240
LLAMSQLGEP IWTWGSDGFR ETLNQEEYAR AFPGGLGPKM AGLRTEASRE TAVVRMDAGR  300
LVDILMDVLA ERMVVSFCSG VSGSVAHHWT NISGTVADPV RIRSRNNDGV PGRPPGVVLN  360
ASTSIWLPVT PKRVFELLRS ESLRNEVFRV PEIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21750.2	6e-44	HD-ZIP family protein