PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV99808.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 250aa MW: 26766.3 Da PI: 6.3924

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV99808.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.0005	107	129	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C C+ksF++ L H +H RWV99808.1 107 YECRTCSKSFPSFQALGGHRASH 129 99**********99999998887 PP
2	zf-C2H2	14	0.00015	169	191	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H RWV99808.1 169 HECSICGLEFNSGQALGGHMRRH 191 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MKLEDSEDTM GSNTSGSICN SGFIPTVVIV KGKRTKRRRI HVPPVSLAVA VDSTSDASSV 60 EVSGCITEED EDMANCLILL AQGRASDAGV KAEGLAGEDG GARRNLYECR TCSKSFPSFQ 120 ALGGHRASHK KPKLAMATAI MAENKKAMGE EDSLQISMNS FPSIKPKIHE CSICGLEFNS 180 GQALGGHMRR HRPLTTSTIQ EAANKERAFL SLDLNLPAPA DDEQDELQRP TSPAFTFALA 240 APSALVDCHY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	36	40	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	4e-47	C2H2 family protein