PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV99948.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C2H2
Protein Properties Length: 449aa    MW: 48309.5 Da    PI: 7.8292
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV99948.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00023193216123
                 EEETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                 y+C  Cg++ s + +L+ H+ t H
  RWV99948.1 193 YPCATCGEVLSKHQLLELHQATkH 216
                 99******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    
MQHSDYRPPR PFLPVARSLA IDLSPIHSLL PLPWPSPSSL FSHSHDEMTT ARSYFSNLLS  60
LFVLLFLHLG CFFFPCNNNA EEQPPPPKRR KVSPSSASLP VSSNPDPKPL KSLSIRSYLS  120
RILSFRRPRT KDQEQQQHPP GDAPVCPSTS LQPIPLSPDA RAGGTQSGGD GKEHVFSGST  180
AKHDSFASRN VVYPCATCGE VLSKHQLLEL HQATKHSLSE LCEADSGYNI VRIIFQSGWK  240
GKSLIVHRVL KIHNTARTLG RYEEYRDAVR SRAARYAATN GGDERCIADG NERLRFYCTT  300
SLCSSDAGRG GNVAPAGVCG SPYCCACAIV RHGFAGKHAD LDGIATHATS WGAHGALPED  360
LEREFAFLGA RRAMLVCRVV AGRVAHGHGG GAAEGDGEEE EDKGAGFDSV VPTGRGGGGG  420
PLDSGVGDDE LLVFSPRALL PCFVIMYTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.18e-60C2H2 family protein