PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV99988.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 374aa MW: 38890.9 Da PI: 9.1609

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV99988.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	127.6	1.3e-39	61	158	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.........k 89 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s + s+s+ s++ + RWV99988.1 61 PPKRSSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRGSGSSISAPshlraanyfN 158 789******************************************************************88854444444444222223333333330 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MEGAAGGPRR PNFPLQLLEK KEEDSCSSSG YPSLAISSGH TGVGGGGGGH EDAANPSRKP 60 PPKRSSTKDR HTKVDGRGRR IRMPALCAAR VFQLTRELGH KSDGETIEWL LQQAEPAVIA 120 ATGTGTIPAN FTSLNISLRG SGSSISAPSH LRAANYFNTA ATALAGQPLS RIHNEWDFSG 180 GPGFSSDGPS SSSSASMLLN FNSGSIGLEG SSDADVGSIR KRRWESEIHH QQQQAQHQMA 240 GYSQASHGGR MPGTVWMVTN PNTQGTLGGG RSGSGGESIW TFPQLGGSTS PTMFRGSLSS 300 GLHFMNFPTP MALLPSQQLG LGSSSGGGEG HMGILAALNA YRPPPPTTSE ATPSQSQQAL 360 GGSQRHDTMS TSDS

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MEGAAGGPRR PNFPLQLLEK KEEDSCSSSG YPSLAISSGH TGVGGGGGGH EDAANPSRKP  60
PPKRSSTKDR HTKVDGRGRR IRMPALCAAR VFQLTRELGH KSDGETIEWL LQQAEPAVIA  120
ATGTGTIPAN FTSLNISLRG SGSSISAPSH LRAANYFNTA ATALAGQPLS RIHNEWDFSG  180
GPGFSSDGPS SSSSASMLLN FNSGSIGLEG SSDADVGSIR KRRWESEIHH QQQQAQHQMA  240
GYSQASHGGR MPGTVWMVTN PNTQGTLGGG RSGSGGESIW TFPQLGGSTS PTMFRGSLSS  300
GLHFMNFPTP MALLPSQQLG LGSSSGGGEG HMGILAALNA YRPPPPTTSE ATPSQSQQAL  360
GGSQRHDTMS TSDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	3e-44	TCP family protein