PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW00274.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 528aa MW: 57180.2 Da PI: 5.1533

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW00274.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.4	2.5e-13	363	407	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h e+Er+RR+++N++f Lr+++P+ K++Ka+ L Av YI++L RWW00274.1 363 HVEAERQRREKLNQCFYALRSVVPNV-----SKMDKASLLADAVAYINEL 407 899********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence
MESFLSSSPV PRWPPPPPLA HSASSSSRST VNSFAPPSFN PETLQQRLNG LIEGSRDNWT 60 YAIFWQSSPT GGGCGGAAVL SWGDGYYRGC DEDKRKPAGV GASSTAEQEH RKRVLRELNA 120 LISDAGGEDA ADEEVSDTEW FFLVSMTQTF APGAGLPGQV LLSGETVWVA GEDRLAAAPC 180 ERARQARAFG LRTMACVPMG SGVVELGSTR DIFQNSEILS KVRLLFGHGG GPATGSLPPP 240 PEQGSVDPCM LWTSEPSAPT PPSHAEKRSS SCLTEDPISI RVAYSLNLTG DALYMESRGS 300 DDGGFLPSST EPKLEGGGGL DSDHSDLEAS AREGTSSGTL EREKRPKKRG RKPANGREEP 360 IDHVEAERQR REKLNQCFYA LRSVVPNVSK MDKASLLADA VAYINELRTK VQAMESDKRR 420 LRSELSFLEK EKAKAKEWTT SESATSGEGE VEVEVKLLGW EAMIRVECDR RAHPAARLMV 480 ALSELEMEVC YANVTAVKEL MIQQATVKMG SRIYTQEQLT AALVARVA

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence

MESFLSSSPV PRWPPPPPLA HSASSSSRST VNSFAPPSFN PETLQQRLNG LIEGSRDNWT  60
YAIFWQSSPT GGGCGGAAVL SWGDGYYRGC DEDKRKPAGV GASSTAEQEH RKRVLRELNA  120
LISDAGGEDA ADEEVSDTEW FFLVSMTQTF APGAGLPGQV LLSGETVWVA GEDRLAAAPC  180
ERARQARAFG LRTMACVPMG SGVVELGSTR DIFQNSEILS KVRLLFGHGG GPATGSLPPP  240
PEQGSVDPCM LWTSEPSAPT PPSHAEKRSS SCLTEDPISI RVAYSLNLTG DALYMESRGS  300
DDGGFLPSST EPKLEGGGGL DSDHSDLEAS AREGTSSGTL EREKRPKKRG RKPANGREEP  360
IDHVEAERQR REKLNQCFYA LRSVVPNVSK MDKASLLADA VAYINELRTK VQAMESDKRR  420
LRSELSFLEK EKAKAKEWTT SESATSGEGE VEVEVKLLGW EAMIRVECDR RAHPAARLMV  480
ALSELEMEVC YANVTAVKEL MIQQATVKMG SRIYTQEQLT AALVARVA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	344	352	KRPKKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46830.1	4e-87	bHLH family protein