PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW00310.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family ARF
Protein Properties Length: 289aa    MW: 32445.1 Da    PI: 8.7694
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW00310.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B371.31.2e-22105206199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae++       + +++  ++l+ +d++ + W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F +  +++++l
  RWW00310.1 105 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QELQARDLHDNLWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIR--DQKQQL 199
                 99*****************************954.4444.49************************************************4..567778 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++++r+
  RWW00310.1 200 LLGIRRA 206
                 9*99997 PP
2Auxin_resp74.82.4e-25231289158
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserr 58 
                 aahaa+++s+F+v+YnPras+seFv++++k++ka++ +++s+GmRf+m+fete+  +rr
  RWW00310.1 231 AAHAAANHSPFTVFYNPRASPSEFVIPFAKYQKAVYsNQISLGMRFRMMFETEELGTRR 289
                 79*********************************989****************98775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MINPELWYAC AGPLVTVPPV GSLVIYFPQG HSEQVAASMQ KDIDAHIPNY PNLPSKLICL  60
LHNADPETDE VYAQMTLQPV NSYDKEALQA SELALKQTRP PTEFFCKTLT ASDTSTHGGF  120
SVPRRAAEKI FPPLDFSMQP PAQELQARDL HDNLWTFRHI YRGQPKRHLL TTGWSLFVSG  180
KRLFAGDSVL FIRDQKQQLL LGIRRANRQP TNISSSVLST DSMHIGILAA AAHAAANHSP  240
FTVFYNPRAS PSEFVIPFAK YQKAVYSNQI SLGMRFRMMF ETEELGTRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.11e-156ARF family protein