PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW00749.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 342aa MW: 39204.9 Da PI: 10.2508

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW00749.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.2	2.4e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd +l +vkq+G++ W++++++m+ ++R +k c +rw +yl RWW00749.1 4 RQRWRAEEDAILRAYVKQYGPREWNLVSQRMNvaLTRDAKACLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.1	1.5e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia +++ gRt+k + +w + RWW00749.1 59 KGSLTEEEQRLVIRLQAKHGNK-WKKIATEVP-GRTPKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MKDRQRWRAE EDAILRAYVK QYGPREWNLV SQRMNVALTR DAKACLERWK NYLKPGIKKG 60 SLTEEEQRLV IRLQAKHGNK WKKIATEVPG RTPKRLGKWW EVFKEKQQNE SNKAAPSPAE 120 PAKYDRILEN FAEKLVRERR GVPLLMAAPF LPPWLSNSGG SHGPSSPSVT LTLSSSTAPP 180 TPQPWLQSEG GAAEGGLGLA MSHKGMALGV SGSVVVDGHI MTELAECCRE VEEGHRAWME 240 QKKEAAWRMR RLELQLESEK TCKRREKMEE MEAKARALRE EQQAALERIE AEYREQIARL 300 RKDAEAKEQK VAEQWAAKHV RLSRFLDQVG YRRWPPAETH GR

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MKDRQRWRAE EDAILRAYVK QYGPREWNLV SQRMNVALTR DAKACLERWK NYLKPGIKKG  60
SLTEEEQRLV IRLQAKHGNK WKKIATEVPG RTPKRLGKWW EVFKEKQQNE SNKAAPSPAE  120
PAKYDRILEN FAEKLVRERR GVPLLMAAPF LPPWLSNSGG SHGPSSPSVT LTLSSSTAPP  180
TPQPWLQSEG GAAEGGLGLA MSHKGMALGV SGSVVVDGHI MTELAECCRE VEEGHRAWME  240
QKKEAAWRMR RLELQLESEK TCKRREKMEE MEAKARALRE EQQAALERIE AEYREQIARL  300
RKDAEAKEQK VAEQWAAKHV RLSRFLDQVG YRRWPPAETH GR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-116	MYB family protein