PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW00795.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 306aa MW: 33741.4 Da PI: 7.3068

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW00795.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	37.6	5e-12	39	86	2	47
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 g+WT+eE + + da +++ g+ +W+++a+ ++ g+t +++s+++ + RWW00795.1 39 GSWTQEENKWFEDALAKFDGDtpdRWAKVAALIP-GKTVGDVVSHYREL 86 89******************************.*********975 PP
2	Myb_DNA-binding	42.1	2e-13	149	193	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E++l++ + +++G+g+W+ I+r + +Rt+ q+ s+ qky RWW00795.1 149 PWTEDEHKLFLLGLRKYGKGDWRNISRNFVITRTPTQVASHAQKY 193 8***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MMTRPWMDVL PGKEAAPPHS YCTNWFVGQQ SSDAGSGSGS WTQEENKWFE DALAKFDGDT 60 PDRWAKVAAL IPGKTVGDVV SHYRELVDDV TEIEAGRIAC PVYYGTSSFT LDWENSHDSE 120 AWKNSYCVGG GAKRSGARSS DHERKKGVPW TEDEHKLFLL GLRKYGKGDW RNISRNFVIT 180 RTPTQVASHA QKYFIRLNSG SKDKRRSSIH DITSVDLPDN RPPSPSSQPS TVTTQSSLAL 240 TPSLSGQFSA IADPDQLGEV ASGFNPSSSH GHRFMQCQFG TNPFGMNLHA QSPQTGKCDQ 300 ANLRIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38090.1	1e-77	MYB family protein