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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWW00840.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | TALE | ||||||||
| Protein Properties | Length: 234aa MW: 26865.6 Da PI: 9.9045 | ||||||||
| Description | TALE family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 28.4 | 2.8e-09 | 157 | 195 | 17 | 55 |
HHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 17 elFeknrypsaeereeLAkklgLterqVkvWFqNrRake 55
el +k +yps++++ LA+ +gL+ +q+ +WF N+R ++
RWW00840.1 157 ELHYKWPYPSETQKVALAEATGLDLKQINNWFINQRKRH 195
5566789*****************************885 PP
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| 2 | ELK | 38 | 3.4e-13 | 115 | 136 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELKhqLl+KYsgyL+sL+qE+s
RWW00840.1 115 ELKHQLLKKYSGYLNSLRQELS 136
9*******************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 234 aa Download sequence |
MPTEKKPAVE KTPTEEKPTA EKKPTEKKPA EKKPKAERKL VEKTPTGKKP TEKTPAAEKK 60 LAEKTLTAER STEMNLSGKF ISSEKFGVCS SGDDQDGNTD NAQLPELLAS AEDRELKHQL 120 LKKYSGYLNS LRQELSKKKK KGKLPRDARQ QLLNWWELHY KWPYPSETQK VALAEATGLD 180 LKQINNWFIN QRKRHWKPSE DMQFVVMDGY HAPNTALYMD GQYFMGEDLY RLGP |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G08150.1 | 3e-63 | TALE family protein | ||||




