PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW00911.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NAC

Protein Properties

Length: 390aa MW: 43120.8 Da PI: 5.2486

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW00911.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.2	7.8e-54	17	162	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..................kvkaeekewyfFskrdkkyatgkrknratksg 81 lppGfrFhPtdee++++yL +kv ++++++ +++ evd++++ePwdLp ++k +ekew+fF++rd+ky+tg+r+nrat++g RWW00911.1 17 LPPGFRFHPTDEEVITHYLSPKVVDHSFSA-TAMGEVDLNRCEPWDLPIlnlfggvggpdvvvciigNAKMGEKEWFFFCQRDRKYPTGTRTNRATETG 114 79************************99.88***********5589******999987777999********************* PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +Wkatgkdke+l+ +g +vg+kktLvfy+grap+gekt+Wvmheyrle RWW00911.1 115 FWKATGKDKEILKGRGVVVGMKKTLVFYRGRAPNGEKTNWVMHEYRLE 162 ********************************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MADVSVVSIE EEECMNLPPG FRFHPTDEEV ITHYLSPKVV DHSFSATAMG EVDLNRCEPW 60 DLPILNLFGG VGGPDVVVCI IGNAKMGEKE WFFFCQRDRK YPTGTRTNRA TETGFWKATG 120 KDKEILKGRG VVVGMKKTLV FYRGRAPNGE KTNWVMHEYR LEGISTLIPN LPKSAKVLFF 180 CVSNVLLLYL SVKGILTLRS QDEWVVCKVF HKDTGLLKNS TLPTLETIDS LGDDILDSTF 240 LPPLMDPPCL DSATRPGSSF SNKDDSFNFQ DVPASFSSMM GVDYHQVGPY LPNSSSYSFL 300 GSMNLSYLHQ EGAMLGALAA AENDAPSSAI RRHCKVEQSS NHSVGCHSQE TGLSTDHNTE 360 ISSVPSKHYV EPGDPSSTVP GFDLENIWQY

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MADVSVVSIE EEECMNLPPG FRFHPTDEEV ITHYLSPKVV DHSFSATAMG EVDLNRCEPW  60
DLPILNLFGG VGGPDVVVCI IGNAKMGEKE WFFFCQRDRK YPTGTRTNRA TETGFWKATG  120
KDKEILKGRG VVVGMKKTLV FYRGRAPNGE KTNWVMHEYR LEGISTLIPN LPKSAKVLFF  180
CVSNVLLLYL SVKGILTLRS QDEWVVCKVF HKDTGLLKNS TLPTLETIDS LGDDILDSTF  240
LPPLMDPPCL DSATRPGSSF SNKDDSFNFQ DVPASFSSMM GVDYHQVGPY LPNSSSYSFL  300
GSMNLSYLHQ EGAMLGALAA AENDAPSSAI RRHCKVEQSS NHSVGCHSQE TGLSTDHNTE  360
ISSVPSKHYV EPGDPSSTVP GFDLENIWQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	8e-88	NAC family protein