PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW00975.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

ARF

Protein Properties

Length: 678aa MW: 74090.8 Da PI: 7.2344

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW00975.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.2	2.8e-22	128	229	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + t++ +d +g +W++++iyr++++r++lt+GW+ Fv++++L +gD++vF + +++ l RWW00975.1 128 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVIAKDVHGVVWKFRHIYRGTPRRHLLTTGWSIFVNQKKLVAGDSIVFL--RAENGDL 222 89**************************996555555..8********************************************..4488889 PP EEEEE-S CS B3 93 vvkvfrk 99 +++++r+ RWW00975.1 223 CIGIRRA 229 **996 PP
2	Auxin_resp	110.1	2.3e-36	297	379	2	83
Auxin_resp 2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a+ a+++++ evvY+Prast+eF+vk++ v++a+++++++GmRfkmafetedss++++ +Gt+++v+ +dpvrWp S+Wr L+ RWW00975.1 297 ASLAASGQPIEVVYYPRASTPEFCVKAAAVRAAMRIQWCPGMRFKMAFETEDSSRISWfMGTISSVQVSDPVRWPVSPWRILQ 379 567899***************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
RFLPLAFGKP MKEPPMKDND KCLDSQLWHA CAGGMVQMPD VNSRVYYFPQ GHAEHAQSAV 60 DFGTSSRIPP LILCRVTAVK FRADKETDEV FAKIQMVPIS NCESNYGEGD GWGLSMNGFD 120 AQEKPASFAK TLTQSDANNG GGFSVPRYCA ETIFPRLDYS ADPPVQTVIA KDVHGVVWKF 180 RHIYRGTPRR HLLTTGWSIF VNQKKLVAGD SIVFLRAENG DLCIGIRRAK RGGFGYGPET 240 PGWNSPNESS ISGYGSFPAF LREEESELMR GSGGNFASSG GMRGRGRVRA DAVIGTASLA 300 ASGQPIEVVY YPRASTPEFC VKAAAVRAAM RIQWCPGMRF KMAFETEDSS RISWFMGTIS 360 SVQVSDPVRW PVSPWRILQV TWDEPDFLQN VKCVNPWLVE LVSHMPAINL AHFSPPSKRP 420 RIPQHPDLPF EGQFSTPMIS RIPLGSGDSP FCCYSDSAPA GIQGARHANF GLPNLHLNKL 480 QTGLFHAGLH RLDHTTPNSR TSTGVIVGNP TIDDDLCCLL TIGHPSQNLK KSCNGKPPQL 540 VLFGQPILTE QQVSLSKSEN VVSLGAAGKS SSGGDLEKTT DASGGSGYAI DQKGSPEAFP 600 SYRDHRASEL GLESGHCKVF MESDDVGRTL DLSVFGSYEE LYGRLADMFG IEKSEMMNQV 660 FYKDAAGAVK HTGDEPFR

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

RFLPLAFGKP MKEPPMKDND KCLDSQLWHA CAGGMVQMPD VNSRVYYFPQ GHAEHAQSAV  60
DFGTSSRIPP LILCRVTAVK FRADKETDEV FAKIQMVPIS NCESNYGEGD GWGLSMNGFD  120
AQEKPASFAK TLTQSDANNG GGFSVPRYCA ETIFPRLDYS ADPPVQTVIA KDVHGVVWKF  180
RHIYRGTPRR HLLTTGWSIF VNQKKLVAGD SIVFLRAENG DLCIGIRRAK RGGFGYGPET  240
PGWNSPNESS ISGYGSFPAF LREEESELMR GSGGNFASSG GMRGRGRVRA DAVIGTASLA  300
ASGQPIEVVY YPRASTPEFC VKAAAVRAAM RIQWCPGMRF KMAFETEDSS RISWFMGTIS  360
SVQVSDPVRW PVSPWRILQV TWDEPDFLQN VKCVNPWLVE LVSHMPAINL AHFSPPSKRP  420
RIPQHPDLPF EGQFSTPMIS RIPLGSGDSP FCCYSDSAPA GIQGARHANF GLPNLHLNKL  480
QTGLFHAGLH RLDHTTPNSR TSTGVIVGNP TIDDDLCCLL TIGHPSQNLK KSCNGKPPQL  540
VLFGQPILTE QQVSLSKSEN VVSLGAAGKS SSGGDLEKTT DASGGSGYAI DQKGSPEAFP  600
SYRDHRASEL GLESGHCKVF MESDDVGRTL DLSVFGSYEE LYGRLADMFG IEKSEMMNQV  660
FYKDAAGAVK HTGDEPFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein