PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW01326.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SBP

Protein Properties

Length: 292aa MW: 32517.7 Da PI: 9.6436

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW01326.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	76.9	3.2e-24	137	191	1	55
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsef 55 +Cq egC+adls ak+yhrrhkvCe+hska+vv+v g +qrfCqqCsr +l++f RWW01326.1 137 RCQSEGCRADLSGAKHYHRRHKVCEFHSKATVVVVGGSQQRFCQQCSRRNRLTDF 191 6***************************************************998 PP
2	SBP	51.1	3.5e-16	198	232	42	76
E-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 42 fCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 f q +rfh l efDe krsCr+rLa+hn+rrrk+ RWW01326.1 198 FLQMVARFHGLAEFDEVKRSCRKRLADHNRRRRKP 232 78999****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MNRSSSAEAY FAPSMMSFVG LEGSSSSQKH QTWDWETSSI DANTTTPVTT SNLQSHPFFP 60 NVPLLDCTPP PLLPMTNSFP FYSPPPQLLP EYPAGLIKRE DGVDGRIGLN LGRRTYFSSG 120 EALTTRGVYS LSHQPPRCQS EGCRADLSGA KHYHRRHKVC EFHSKATVVV VGGSQQRFCQ 180 QCSRRNRLTD FFIFCLMFLQ MVARFHGLAE FDEVKRSCRK RLADHNRRRR KPPPPATMAE 240 QSPSAPNNTN PSSRAQKTTR DSSNLGAPIP LSYLSPPSYA CNLSSSHAFT TV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	215	232	KRSCRKRLADHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	7e-37	SBP family protein