PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW01486.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family HD-ZIP
Protein Properties Length: 234aa    MW: 27019.6 Da    PI: 9.2039
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW01486.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.3e-1981135357
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
    Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                 k++++++eq++ Le  F+ +r++   ++++LA++lgL+ +qV vWFqNrRa++k+
  RWW01486.1  81 KKRRLSDEQVRFLEMSFRDERKLASGRKAHLAAELGLDGNQVAVWFQNRRARHKN 135
                 45689************************************************95 PP
2HD-ZIP_I/II1087e-3581171292
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  kkrrls+eqv++LE+sF+ e+kL + rK++la eLgl+  qvavWFqnrRAR+k+kqlE+ y +Lk +++a++ ++++Le+ev +L+e+l 
   RWW01486.1  81 KKRRLSDEQVRFLEMSFRDERKLASGRKAHLAAELGLDGNQVAVWFQNRRARHKNKQLEETYLKLKLEHEAVVIDKCHLENEVLRLKEKLL 171
                  9**************************************************************************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MPPTFTRSVS STLSSLYIGI NVAMERYRTS DDEVVTYSSW RRVVPTDAAF PSSLAKANVM  60
FSVSETRTRR RRRRKANGDA KKRRLSDEQV RFLEMSFRDE RKLASGRKAH LAAELGLDGN  120
QVAVWFQNRR ARHKNKQLEE TYLKLKLEHE AVVIDKCHLE NEVLRLKEKL LEAEEEIRKL  180
SWSVNGGNLG SSFSAVSLQP TLGGFGMEEE AELAYMDEYD FYNYTMEWTN PYGM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16974RRRRRR
26975RRRRRRK
36984RRRRRRKANGDAKKRR
46985RRRRRRKANGDAKKRRL
57085RRRRRRKANGDAKKRR
67086RRRRRRKANGDAKKRRL
77187RRRRRRKANGDAKKRRL
8129137RRARHKNKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36740.12e-31HD-ZIP family protein