PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW01508.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family ARF
Protein Properties Length: 328aa    MW: 37300.6 Da    PI: 9.7964
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW01508.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B371.98.1e-2371172199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae++       + +++  ++l+ +d++ + W++++iyr++++ry+lt+GW+ Fv+ ++L +gD+v+F +  +++++l
  RWW01508.1  71 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QELQARDLHDNLWTFRHIYRGQPKRYLLTTGWSLFVSGKRLFAGDSVLFIR--DQKQQL 165
                 99*****************************954.4444.49************************************************4..567778 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++++r+
  RWW01508.1 166 LLGIRRA 172
                 9*99997 PP
2Auxin_resp122.82.5e-40197280183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+++s+F+v+YnPras+seFv++++k++ka++ +++s+GmRf+m+fete+  +rr++Gt++g+sdldpvrW+nS+Wr+L+
  RWW01508.1 197 AAHAAANHSPFTVFYNPRASPSEFVIPFAKYQKAVYsNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQ 280
                 79*********************************989********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MQKDINAHIP NYPNLPSKLI CLLHNVTLHA DPETDEVYAQ MTLQPVNSYD KEALQASELA  60
LKQTRPQTEF FCKTLTASDT STHGGFSVPR RAAEKIFPPL DFSMQPPAQE LQARDLHDNL  120
WTFRHIYRGQ PKRYLLTTGW SLFVSGKRLF AGDSVLFIRD QKQQLLLGIR RANRQPTNLS  180
SSVLSTDSMH IGILAAAAHA AANHSPFTVF YNPRASPSEF VIPFAKYQKA VYSNQISLGM  240
RFRMMFETEE LGTRRYMGTI TGISDLDPVR WKNSQWRNLQ VGWDESAAGE RRNRVSIWEI  300
EPVVAPFFIC PPPFFGKRPR QPGMPGTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein