PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW02056.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 158aa    MW: 16888.2 Da    PI: 8.5887
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW02056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH36.21e-115377327
                S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH  3 telCrffartGtCkyGdrCkFaHgp 27
                +++C f++r+G+Ck+G  CkF H++
  RWW02056.1 53 EPICIFYSRYGICKFGTHCKFDHPM 77
                689********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MRVQTQTRVC SINCQAIAAA RIKGGYPERV GQPECEPNTV VSLRGSSVYP GEEPICIFYS  60
RYGICKFGTH CKFDHPMAAP MGIYAYGLAT SSLTDVAAAR NLLVTSSGPP SFQAPLEVAT  120
GKSRRLLFAD SLQIASSDER IKSEGSQATS SNGKLSSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02830.13e-17C3H family protein